If no regions of interest are defined, no BED file is created. more.
I can see the information on specific SNPs in the VCF file but, the BAM files, even though presented as a track in the IGV, shows zero coverage and do not show ...
Adding a track line to a data file modifies IGV's default display options. This can be particularly useful for file formats not associated with any particular type of ...
files from the local file system, IGV cannot automatically load ...
Tracks. When you load a BAM file, IGV automatically searches for the index file within
Note we have chromosomes and a gene track automatically displayed.
Note that a downloadable FASTA file is not available for all hosted genomes.
Side-note on displaying BLAST results as GFF files in IGV or other browsers
Search results are displayed in two new tracks; one displays matches on the
For quantitative data tracks: Data Display: • Change between bar ...